IL_3EOH_010

3D structure

PDB id

3EOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined group II intron structure

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

GAGGU*AAGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3EOH_010 not in the Motif Atlas

Geometric match to IL_3IGI_010

Geometric discrepancy: 0.1626

The information below is about IL_3IGI_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96788.1

Basepair signature

cWW-tHW-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

3EOH|1|A|G|267
3EOH|1|A|A|268
3EOH|1|A|G|269
3EOH|1|A|G|270
3EOH|1|A|U|271
*
3EOH|1|A|A|282
3EOH|1|A|A|283
3EOH|1|A|G|284
3EOH|1|A|U|285
3EOH|1|A|C|286

Current chains

Chain A

Group IIC intron

Nearby chains