IL_3FTF_001

3D structure

PDB id

3FTF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of A. aeolicus KsgA in complex with RNA and SAH

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGAAC*GGGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Quadruple sheared

Broad Annotation

No text annotation

Motif group

IL_06136.2

Basepair signature

cWW-tHS-cWW-tHS-tSH-tSH-cWW

Number of instances in this motif group

6

Unit IDs

3FTF|1|C|G|1515
3FTF|1|C|G|1516
3FTF|1|C|G|1517
3FTF|1|C|A|1518
3FTF|1|C|A|1519
3FTF|1|C|C|1520
*
3FTF|1|D|G|1515
3FTF|1|D|G|1516
3FTF|1|D|G|1517
3FTF|1|D|A|1518
3FTF|1|D|A|1519
3FTF|1|D|C|1520

Current chains

Chain C

5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*CP*GP*GP*UP*U)-3'

Chain D

5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*CP*GP*GP*UP*U)-3'

Nearby chains

Chain A

Dimethyladenosine transferase