3D structure

PDB id
3G4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GGG*CCAUC
Length
8 nucleotides
Bulged bases
3G4S|1|0|G|869, 3G4S|1|0|C|881, 3G4S|1|0|A|882
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3G4S_032 not in the Motif Atlas
Geometric match to IL_4V9F_030
Geometric discrepancy: 0.1023
The information below is about IL_4V9F_030
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_57881.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
1

Unit IDs

3G4S|1|0|G|868
3G4S|1|0|G|869
3G4S|1|0|G|870
*
3G4S|1|0|C|880
3G4S|1|0|C|881
3G4S|1|0|A|882
3G4S|1|0|U|883
3G4S|1|0|C|884

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L37e
Chain A
50S ribosomal protein L2P
Chain M
50S ribosomal protein L15e
Chain R
50S ribosomal protein L22P

Coloring options:


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