IL_3G4S_076

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AUG*CU

Length

5 nucleotides

Bulged bases

3G4S|1|0|U|2109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3G4S_076 not in the Motif Atlas

Homologous match to IL_4V9F_074

Geometric discrepancy: 0.1591

The information below is about IL_4V9F_074

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

3G4S|1|0|A|2108
3G4S|1|0|U|2109
3G4S|1|0|G|2110
*
3G4S|1|0|C|2477
3G4S|1|0|U|2478

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain L

50S ribosomal protein L15P