IL_3G4S_097

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UU*ACGUG

Length

7 nucleotides

Bulged bases

3G4S|1|0|U|2749

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3G4S_097 not in the Motif Atlas

Homologous match to IL_4V9F_095

Geometric discrepancy: 0.1207

The information below is about IL_4V9F_095

Detailed Annotation

Bulged stacked bases

Broad Annotation

No text annotation

Motif group

IL_07171.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

3G4S|1|0|U|2732
3G4S|1|0|U|2733
*
3G4S|1|0|A|2746
3G4S|1|0|C|2747
3G4S|1|0|G|2748
3G4S|1|0|U|2749
3G4S|1|0|G|2750

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain X

50S ribosomal protein L31e