IL_3G6E_011
3D structure
- PDB id
- 3G6E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CUCUCAUC*GUGCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3G6E_011 not in the Motif Atlas
- Homologous match to IL_4V9F_011
- Geometric discrepancy: 0.4576
- The information below is about IL_4V9F_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22028.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
3G6E|1|0|C|280
3G6E|1|0|U|281
3G6E|1|0|C|282
3G6E|1|0|U|283
3G6E|1|0|C|284
3G6E|1|0|A|285
3G6E|1|0|U|286
3G6E|1|0|C|287
*
3G6E|1|0|G|365
3G6E|1|0|U|366
3G6E|1|0|G|367
3G6E|1|0|C|368
3G6E|1|0|G|369
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L15e
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