IL_3G78_010

3D structure

PDB id

3G78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insight into group II intron catalysis from revised crystal structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGAG*CAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31555.2

Basepair signature

cWW-cWW-tSH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

3G78|1|A|U|172
3G78|1|A|G|173
3G78|1|A|A|174
3G78|1|A|G|175
*
3G78|1|A|C|190
3G78|1|A|A|191
3G78|1|A|A|192
3G78|1|A|A|193
3G78|1|A|G|194

Current chains

Chain A

Group II intron

Nearby chains