IL_3GTK_001
3D structure
- PDB id
- 3GTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Backtracked RNA polymerase II complex with 18mer RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CTTATC*GATAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3GTK|1|N|DC|4
3GTK|1|N|DT|5
3GTK|1|N|DT|6
3GTK|1|N|DA|7
3GTK|1|N|DT|8
3GTK|1|N|DC|9
*
3GTK|1|T|DG|6
3GTK|1|T|DA|7
3GTK|1|T|DT|8
3GTK|1|T|DA|9
3GTK|1|T|DA|10
3GTK|1|T|DG|11
Current chains
- Chain N
- DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3')
- Chain T
- DNA (29-MER)
Nearby chains
- Chain A
- DNA-directed RNA polymerase II subunit RPB1
- Chain B
- DNA-directed RNA polymerase II subunit RPB2
- Chain E
- DNA-directed RNA polymerases I, II, and III subunit RPABC1
Coloring options: