IL_3I56_027

3D structure

PDB id

3I56 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAAG*UGGAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3I56_027 not in the Motif Atlas

Geometric match to IL_4V9F_027

Geometric discrepancy: 0.0613

The information below is about IL_4V9F_027

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

3I56|1|0|U|794
3I56|1|0|G|795
3I56|1|0|A|796
3I56|1|0|A|797
3I56|1|0|G|798
*
3I56|1|0|U|815
3I56|1|0|G|816
3I56|1|0|G|817
3I56|1|0|A|818
3I56|1|0|A|819

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain P

50S ribosomal protein L19e

Chain Z

50S ribosomal protein L37Ae