3D structure

PDB id
3IAB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of RNase P /RNase MRP proteins Pop6, Pop7 in a complex with the P3 domain of RNase MRP RNA
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CAGUAAUAUG*CUUACAAAAUGG
Length
22 nucleotides
Bulged bases
3IAB|1|R|G|66, 3IAB|1|R|U|70, 3IAB|1|R|U|72, 3IAB|1|R|U|89, 3IAB|1|R|U|90, 3IAB|1|R|A|91, 3IAB|1|R|C|92, 3IAB|1|R|A|94, 3IAB|1|R|A|96, 3IAB|1|R|U|97, 3IAB|1|R|G|98
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_45896.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
1

Unit IDs

3IAB|1|R|C|64
3IAB|1|R|A|65
3IAB|1|R|G|66
3IAB|1|R|U|67
3IAB|1|R|A|68
3IAB|1|R|A|69
3IAB|1|R|U|70
3IAB|1|R|A|71
3IAB|1|R|U|72
3IAB|1|R|G|73
*
3IAB|1|R|C|88
3IAB|1|R|U|89
3IAB|1|R|U|90
3IAB|1|R|A|91
3IAB|1|R|C|92
3IAB|1|R|A|93
3IAB|1|R|A|94
3IAB|1|R|A|95
3IAB|1|R|A|96
3IAB|1|R|U|97
3IAB|1|R|G|98
3IAB|1|R|G|99

Current chains

Chain R
P3 domain of the RNA component of RNase MRP

Nearby chains

Chain A
Ribonucleases P/MRP protein subunit POP6
Chain B
Ribonucleases P/MRP protein subunit POP7

Coloring options:

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