IL_3IIN_002
3D structure
- PDB id
- 3IIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Plasticity of the kink turn structural motif
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.18 Å
Loop
- Sequence
- GAAAC*GCAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3IIN_002 not in the Motif Atlas
- Geometric match to IL_1U6B_002
- Geometric discrepancy: 0.1141
- The information below is about IL_1U6B_002
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
3IIN|1|B|G|56
3IIN|1|B|A|57
3IIN|1|B|A|58
3IIN|1|B|A|59
3IIN|1|B|C|60
*
3IIN|1|B|G|84
3IIN|1|B|C|85
3IIN|1|B|A|86
3IIN|1|B|A|87
3IIN|1|B|C|88
Current chains
- Chain B
- Group I intron
Nearby chains
- Chain C
- DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3')
- Chain D
- DNA/RNA (5'-R(*CP*A)-D(P*T)-3')
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