IL_3IIN_003
3D structure
- PDB id
- 3IIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Plasticity of the kink turn structural motif
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.18 Å
Loop
- Sequence
- CUAAG*UAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3IIN_003 not in the Motif Atlas
- Geometric match to IL_1U6B_003
- Geometric discrepancy: 0.1161
- The information below is about IL_1U6B_003
- Detailed Annotation
- Receptor of 11-nt loop-receptor motif
- Broad Annotation
- Loop-receptor motif
- Motif group
- IL_95104.1
- Basepair signature
- cWW-tWH-cWW-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
3IIN|1|B|C|61
3IIN|1|B|U|62
3IIN|1|B|A|63
3IIN|1|B|A|64
3IIN|1|B|G|65
*
3IIN|1|B|U|80
3IIN|1|B|A|81
3IIN|1|B|U|82
3IIN|1|B|G|83
Current chains
- Chain B
- Group I intron
Nearby chains
- Chain C
- DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3')
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