IL_3IIN_011

3D structure

PDB id

3IIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Plasticity of the kink turn structural motif

Experimental method

X-RAY DIFFRACTION

Resolution

4.18 Å

Loop

Sequence

GGAG*CACAGAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3IIN_011 not in the Motif Atlas

Geometric match to IL_1U6B_011

Geometric discrepancy: 0.1529

The information below is about IL_1U6B_011

Detailed Annotation

Reverse kink-turn

Broad Annotation

No text annotation

Motif group

IL_09908.1

Basepair signature

cWW-L-tHH-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

3IIN|1|B|G|181
3IIN|1|B|G|182
3IIN|1|B|A|183
3IIN|1|B|G|184
*
3IIN|1|C|C|197
3IIN|1|C|A|198
3IIN|1|C|C|199
3IIN|1|C|A|200
3IIN|1|C|G|201
3IIN|1|C|A|202
3IIN|1|C|C|203

Current chains

Chain B

Group I intron

Chain C

DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3')

Nearby chains