IL_3IZ4_002

3D structure

PDB id

3IZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGCGAAACC*GACGUAGG

Length

17 nucleotides

Bulged bases

3IZ4|1|A|G|339

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3IZ4|1|A|U|28
3IZ4|1|A|G|29
3IZ4|1|A|C|30
3IZ4|1|A|G|31
3IZ4|1|A|A|32
3IZ4|1|A|A|33
3IZ4|1|A|A|34
3IZ4|1|A|C|35
3IZ4|1|A|C|36
*
3IZ4|1|A|G|333
3IZ4|1|A|A|334
3IZ4|1|A|C|335
3IZ4|1|A|G|336
3IZ4|1|A|U|337
3IZ4|1|A|A|338
3IZ4|1|A|G|339
3IZ4|1|A|G|340

Current chains

Chain A

Modified E. coli transfer-messenger RNA

Nearby chains