IL_3IZ4_016

3D structure

PDB id

3IZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

CGUGGAAG*UUGAAGCG

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3IZ4|1|A|C|216
3IZ4|1|A|G|217
3IZ4|1|A|U|218
3IZ4|1|A|G|219
3IZ4|1|A|G|220
3IZ4|1|A|A|221
3IZ4|1|A|A|222
3IZ4|1|A|G|223
*
3IZ4|1|A|U|236
3IZ4|1|A|U|237
3IZ4|1|A|G|238
3IZ4|1|A|A|239
3IZ4|1|A|A|240
3IZ4|1|A|G|241
3IZ4|1|A|C|242
3IZ4|1|A|G|243

Current chains

Chain A

Modified E. coli transfer-messenger RNA

Nearby chains