IL_3J0D_008
3D structure
- PDB id
- 3J0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 11.1 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J0D_008 not in the Motif Atlas
- Geometric match to IL_5J7L_062
- Geometric discrepancy: 0.1316
- The information below is about IL_5J7L_062
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
3J0D|1|H|G|1416
3J0D|1|H|G|1417
3J0D|1|H|A|1418
3J0D|1|H|G|1419
*
3J0D|1|h|U|1481
3J0D|1|h|G|1482
3J0D|1|h|A|1483
3J0D|1|h|C|1484
Current chains
- Chain H
- ribosomal 16S RNA
- Chain h
- ribosomal 16S RNA
Nearby chains
- Chain C
- ribosomal 23S RNA
- Chain I
- 30S ribosomal protein S12
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