3D structure

PDB id
3J5L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli 50S subunit with ErmBL nascent chain
Experimental method
ELECTRON MICROSCOPY
Resolution
6.6 Å

Loop

Sequence
GACGC*GCGUU
Length
10 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J5L|1|A|G|1168
3J5L|1|A|A|1169
3J5L|1|A|C|1170
3J5L|1|A|G|1171
3J5L|1|A|C|1172
*
3J5L|1|A|G|1177
3J5L|1|A|C|1178
3J5L|1|A|G|1179
3J5L|1|A|U|1180
3J5L|1|A|U|1181

Current chains

Chain A
23S ribsomal RNA

Nearby chains

Chain R
50S ribosomal protein L21

Coloring options:

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