IL_3J6B_005

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUACUAAUA*UUAAAA

Length

15 nucleotides

Bulged bases

3J6B|1|A|C|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|U|113
3J6B|1|A|U|114
3J6B|1|A|A|115
3J6B|1|A|C|116
3J6B|1|A|U|117
3J6B|1|A|A|118
3J6B|1|A|A|119
3J6B|1|A|U|120
3J6B|1|A|A|121
*
3J6B|1|A|U|140
3J6B|1|A|U|141
3J6B|1|A|A|142
3J6B|1|A|A|143
3J6B|1|A|A|144
3J6B|1|A|A|145

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 3

54S ribosomal protein L27, mitochondrial

Chain P

54S ribosomal protein L41, mitochondrial

Chain Q

54S ribosomal protein L40, mitochondrial

Chain T

54S ribosomal protein L4, mitochondrial

Chain Y

54S ribosomal protein L34, mitochondrial