IL_3J6B_018

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAG*CAAAUC

Length

10 nucleotides

Bulged bases

3J6B|1|A|A|679, 3J6B|1|A|A|680, 3J6B|1|A|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|G|666
3J6B|1|A|U|667
3J6B|1|A|A|668
3J6B|1|A|G|669
*
3J6B|1|A|C|677
3J6B|1|A|A|678
3J6B|1|A|A|679
3J6B|1|A|A|680
3J6B|1|A|U|681
3J6B|1|A|C|682

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial

Chain D

54S ribosomal protein YmL6, mitochondrial

Chain O

54S ribosomal protein L22, mitochondrial

Chain Y

54S ribosomal protein L34, mitochondrial