IL_3J6B_035

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUACGGCC*GAUAAUC

Length

15 nucleotides

Bulged bases

3J6B|1|A|A|1357, 3J6B|1|A|U|1408

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|G|1355
3J6B|1|A|U|1356
3J6B|1|A|A|1357
3J6B|1|A|C|1358
3J6B|1|A|G|1359
3J6B|1|A|G|1360
3J6B|1|A|C|1361
3J6B|1|A|C|1362
*
3J6B|1|A|G|1403
3J6B|1|A|A|1404
3J6B|1|A|U|1405
3J6B|1|A|A|1406
3J6B|1|A|A|1407
3J6B|1|A|U|1408
3J6B|1|A|C|1409

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 3

54S ribosomal protein L27, mitochondrial

Chain P

54S ribosomal protein L41, mitochondrial

Chain d

Mitochondrial homologous recombination protein 1