IL_3J6B_042
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUAAU*AGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_042 not in the Motif Atlas
- Homologous match to IL_5J7L_304
- Geometric discrepancy: 0.2357
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
3J6B|1|A|G|1603
3J6B|1|A|A|1604
3J6B|1|A|U|1605
3J6B|1|A|A|1606
3J6B|1|A|A|1607
3J6B|1|A|U|1608
*
3J6B|1|A|A|1904
3J6B|1|A|G|1905
3J6B|1|A|C|1906
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- 54S ribosomal protein L9, mitochondrial
- Chain L
- 54S ribosomal protein L8, mitochondrial
- Chain W
- 54S ribosomal protein L32, mitochondrial
Coloring options: