IL_3J6B_067
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAC*GAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_067 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.2819
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
3J6B|1|A|U|2617
3J6B|1|A|A|2618
3J6B|1|A|A|2619
3J6B|1|A|C|2620
*
3J6B|1|A|G|2631
3J6B|1|A|A|2632
3J6B|1|A|A|2633
3J6B|1|A|A|2634
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 1
- 54S ribosomal protein L35, mitochondrial
- Chain E
- 54S ribosomal protein L7, mitochondrial
- Chain R
- 54S ribosomal protein L2, mitochondrial
- Chain Z
- mitochondrial ribosomal protein YNL122C
Coloring options: