IL_3J6B_068
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_068 not in the Motif Atlas
- Homologous match to IL_7RQB_090
- Geometric discrepancy: 0.2987
- The information below is about IL_7RQB_090
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_27635.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 38
Unit IDs
3J6B|1|A|C|2668
3J6B|1|A|A|2669
3J6B|1|A|C|2670
*
3J6B|1|A|G|2681
3J6B|1|A|G|2682
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain J
- 54S ribosomal protein L10, mitochondrial
- Chain X
- 54S ribosomal protein L39, mitochondrial
- Chain Z
- mitochondrial ribosomal protein YNL122C
- Chain b
- 54S ribosomal protein L25, mitochondrial
Coloring options: