IL_3J71_061

3D structure

PDB id

3J71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUAGG*CCGGG

Length

11 nucleotides

Bulged bases

3J71|1|5|A|2313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J71|1|5|C|2310
3J71|1|5|C|2311
3J71|1|5|U|2312
3J71|1|5|A|2313
3J71|1|5|G|2314
3J71|1|5|G|2315
*
3J71|1|5|C|2324
3J71|1|5|C|2325
3J71|1|5|G|2326
3J71|1|5|G|2327
3J71|1|5|G|2328

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain e

Ribosomal protein eL32

Chain r

Ribosomal protein eL28