3D structure

PDB id
3J71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian 60S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGGUC*GGCGCCUAGC
Length
15 nucleotides
Bulged bases
3J71|1|5|U|3595, 3J71|1|5|A|3596
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J71|1|5|G|2901
3J71|1|5|G|2902
3J71|1|5|G|2903
3J71|1|5|U|2904
3J71|1|5|C|2905
*
3J71|1|5|G|3589
3J71|1|5|G|3590
3J71|1|5|C|3591
3J71|1|5|G|3592
3J71|1|5|C|3593
3J71|1|5|C|3594
3J71|1|5|U|3595
3J71|1|5|A|3596
3J71|1|5|G|3597
3J71|1|5|C|3598

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain R
Ribosomal protein eL19

Coloring options:

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