IL_3J71_106

3D structure

PDB id

3J71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCGGAGCC*GGAACCUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J71|1|5|C|4739
3J71|1|5|G|4740
3J71|1|5|C|4741
3J71|1|5|G|4742
3J71|1|5|G|4743
3J71|1|5|A|4744
3J71|1|5|G|4745
3J71|1|5|C|4746
3J71|1|5|C|4747
*
3J71|1|5|G|4953
3J71|1|5|G|4954
3J71|1|5|A|4955
3J71|1|5|A|4956
3J71|1|5|C|4957
3J71|1|5|C|4958
3J71|1|5|U|4959
3J71|1|5|G|4960

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain f

Ribosomal protein eL33