IL_3J71_135
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 3J71|1|5|U|2090, 3J71|1|5|A|2093, 3J71|1|5|G|2111, 3J71|1|5|G|2114, 3J71|1|5|G|2115, 3J71|1|5|C|2116, 3J71|1|5|C|2119, 3J71|1|5|G|2122, 3J71|1|5|C|2123, 3J71|1|5|G|2124, 3J71|1|5|C|2248, 3J71|1|5|C|2249, 3J71|1|5|C|2256, 3J71|1|5|G|2259, 3J71|1|5|C|2260, 3J71|1|5|U|2267, 3J71|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|C|2087
3J71|1|5|A|2088
3J71|1|5|G|2089
3J71|1|5|U|2090
3J71|1|5|C|2091
3J71|1|5|G|2092
3J71|1|5|A|2093
3J71|1|5|G|2094
3J71|1|5|A|2095
3J71|1|5|G|2096
3J71|1|5|U|2097
3J71|1|5|G|2098
3J71|1|5|G|2099
3J71|1|5|A|2100
3J71|1|5|C|2101
3J71|1|5|G|2102
3J71|1|5|G|2103
3J71|1|5|G|2104
3J71|1|5|A|2105
3J71|1|5|G|2106
3J71|1|5|C|2107
3J71|1|5|G|2108
3J71|1|5|G|2109
3J71|1|5|C|2110
3J71|1|5|G|2111
3J71|1|5|G|2112
3J71|1|5|G|2113
3J71|1|5|G|2114
3J71|1|5|G|2115
3J71|1|5|C|2116
3J71|1|5|G|2117
3J71|1|5|G|2118
3J71|1|5|C|2119
3J71|1|5|G|2120
3J71|1|5|C|2121
3J71|1|5|G|2122
3J71|1|5|C|2123
3J71|1|5|G|2124
3J71|1|5|C|2125
3J71|1|5|G|2126
3J71|1|5|C|2127
3J71|1|5|G|2128
*
3J71|1|5|C|2246
3J71|1|5|C|2247
3J71|1|5|C|2248
3J71|1|5|C|2249
3J71|1|5|C|2250
3J71|1|5|G|2251
3J71|1|5|G|2252
3J71|1|5|A|2253
3J71|1|5|G|2254
3J71|1|5|C|2255
3J71|1|5|C|2256
3J71|1|5|C|2257
3J71|1|5|C|2258
3J71|1|5|G|2259
3J71|1|5|C|2260
3J71|1|5|G|2261
3J71|1|5|G|2262
3J71|1|5|A|2263
3J71|1|5|C|2264
3J71|1|5|G|2265
3J71|1|5|C|2266
3J71|1|5|U|2267
3J71|1|5|A|2268
3J71|1|5|C|2269
3J71|1|5|G|2270
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain E
- Ribosomal protein eL6
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
- Chain r
- Ribosomal protein eL28
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