IL_3J72_008

3D structure

PDB id

3J72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCUCC*GCCCG

Length

11 nucleotides

Bulged bases

3J72|1|5|C|264, 3J72|1|5|C|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J72|1|5|C|168
3J72|1|5|G|169
3J72|1|5|C|170
3J72|1|5|U|171
3J72|1|5|C|172
3J72|1|5|C|173
*
3J72|1|5|G|263
3J72|1|5|C|264
3J72|1|5|C|265
3J72|1|5|C|266
3J72|1|5|G|267

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

Ribosomal protein eL13

Chain h

Ribosomal protein uL29