IL_3J72_039

3D structure

PDB id

3J72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCGCCCG*CGGGGAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J72|1|5|C|1472
3J72|1|5|U|1473
3J72|1|5|C|1474
3J72|1|5|G|1475
3J72|1|5|C|1476
3J72|1|5|C|1477
3J72|1|5|C|1478
3J72|1|5|G|1479
*
3J72|1|5|C|1486
3J72|1|5|G|1487
3J72|1|5|G|1488
3J72|1|5|G|1489
3J72|1|5|G|1490
3J72|1|5|A|1491
3J72|1|5|G|1492

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

Ribosomal protein eL13

Chain a

Ribosomal protein uL15

Chain b

Ribosomal protein eL29

Chain o

Ribosomal protein eL42