IL_3J72_056

3D structure

PDB id

3J72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUAGACAGCA*UGCCGAA

Length

18 nucleotides

Bulged bases

3J72|1|5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J72|1|5|U|1957
3J72|1|5|A|1958
3J72|1|5|U|1959
3J72|1|5|A|1960
3J72|1|5|G|1961
3J72|1|5|A|1962
3J72|1|5|C|1963
3J72|1|5|A|1964
3J72|1|5|G|1965
3J72|1|5|C|1966
3J72|1|5|A|1967
*
3J72|1|5|U|2020
3J72|1|5|G|2021
3J72|1|5|C|2022
3J72|1|5|C|2023
3J72|1|5|G|2024
3J72|1|5|A|2025
3J72|1|5|A|2026

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain m

Ribosomal protein eL40