IL_3J72_149
3D structure
- PDB id
- 3J72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGGGGUUUCGUACGUAGCAGAG*CGAUCUAUUGAAAGUCAGCCCUCG
- Length
- 46 nucleotides
- Bulged bases
- 3J72|1|5|U|5006, 3J72|1|5|C|5013, 3J72|1|5|A|5016, 3J72|1|5|G|5041, 3J72|1|5|G|5049, 3J72|1|5|C|5054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J72|1|5|C|4996
3J72|1|5|G|4997
3J72|1|5|G|4998
3J72|1|5|G|4999
3J72|1|5|G|5000
3J72|1|5|U|5001
3J72|1|5|U|5002
3J72|1|5|U|5003
3J72|1|5|C|5004
3J72|1|5|G|5005
3J72|1|5|U|5006
3J72|1|5|A|5007
3J72|1|5|C|5008
3J72|1|5|G|5009
3J72|1|5|U|5010
3J72|1|5|A|5011
3J72|1|5|G|5012
3J72|1|5|C|5013
3J72|1|5|A|5014
3J72|1|5|G|5015
3J72|1|5|A|5016
3J72|1|5|G|5017
*
3J72|1|5|C|5032
3J72|1|5|G|5033
3J72|1|5|A|5034
3J72|1|5|U|5035
3J72|1|5|C|5036
3J72|1|5|U|5037
3J72|1|5|A|5038
3J72|1|5|U|5039
3J72|1|5|U|5040
3J72|1|5|G|5041
3J72|1|5|A|5042
3J72|1|5|A|5043
3J72|1|5|A|5044
3J72|1|5|G|5045
3J72|1|5|U|5046
3J72|1|5|C|5047
3J72|1|5|A|5048
3J72|1|5|G|5049
3J72|1|5|C|5050
3J72|1|5|C|5051
3J72|1|5|C|5052
3J72|1|5|U|5053
3J72|1|5|C|5054
3J72|1|5|G|5055
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain R
- Ribosomal protein eL19
- Chain U
- Ribosomal protein eL22
- Chain W
- Ribosomal protein eL24
- Chain d
- Ribosomal protein eL31
Coloring options: