IL_3J7A_011
3D structure
- PDB id
- 3J7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3J7A|1|A|U|168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_97118.1
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
3J7A|1|A|G|141
3J7A|1|A|G|142
3J7A|1|A|A|143
3J7A|1|A|U|144
3J7A|1|A|A|145
3J7A|1|A|A|146
3J7A|1|A|C|147
*
3J7A|1|A|G|163
3J7A|1|A|C|164
3J7A|1|A|U|165
3J7A|1|A|A|166
3J7A|1|A|A|167
3J7A|1|A|U|168
3J7A|1|A|A|169
3J7A|1|A|C|170
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 1
- 40S ribosomal protein eS24
- Chain H
- 40S ribosomal protein eS6
- Chain L
- 40S ribosomal protein eS8
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