IL_3J7A_026
3D structure
- PDB id
- 3J7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases (A, C, G, U)
- 586A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29931.1
- Basepair signature
- cWW-R-R-tWH-cSW-L-R-R-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
3J7A|1|A|G|569
3J7A|1|A|U|570
3J7A|1|A|G|571
3J7A|1|A|C|572
3J7A|1|A|C|573
3J7A|1|A|A|574
3J7A|1|A|G|575
*
3J7A|1|A|C|582
3J7A|1|A|G|583
3J7A|1|A|G|584
3J7A|1|A|U|585
3J7A|1|A|A|586
3J7A|1|A|A|587
3J7A|1|A|U|588
3J7A|1|A|U|589
3J7A|1|A|C|590
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 6
- 40S ribosomal protein eS30
- Chain D
- 40S ribosomal protein uS3
- Chain Q
- 40S ribosomal protein uS12
Coloring options: