IL_3J7A_085
3D structure
- PDB id
- 3J7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUAUAACGA*UUUAUCAAUAU
- Length
- 20 nucleotides
- Bulged bases
- 3J7A|1|A|A|1818, 3J7A|1|A|U|1819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7A|1|A|A|1725
3J7A|1|A|U|1726
3J7A|1|A|A|1727
3J7A|1|A|U|1728
3J7A|1|A|A|1729
3J7A|1|A|A|1730
3J7A|1|A|C|1731
3J7A|1|A|G|1732
3J7A|1|A|A|1733
*
3J7A|1|A|U|1815
3J7A|1|A|U|1816
3J7A|1|A|U|1817
3J7A|1|A|A|1818
3J7A|1|A|U|1819
3J7A|1|A|C|1820
3J7A|1|A|A|1821
3J7A|1|A|A|1822
3J7A|1|A|U|1823
3J7A|1|A|A|1824
3J7A|1|A|U|1825
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 2
- 40S ribosomal protein eS25
- Chain D
- 40S ribosomal protein uS3
- Chain I
- 40S ribosomal protein uS7
- Chain M
- 40S ribosomal protein uS9
- Chain N
- 40S ribosomal protein uS10
- Chain T
- 40S ribosomal protein uS14
- Chain Y
- 40S ribosomal protein eS19
Coloring options: