IL_3J7Q_007

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCGAAU*ACAUGUGG

Length

14 nucleotides

Bulged bases

3J7Q|1|5|G|119, 3J7Q|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|C|117
3J7Q|1|5|C|118
3J7Q|1|5|G|119
3J7Q|1|5|A|120
3J7Q|1|5|A|121
3J7Q|1|5|U|122
*
3J7Q|1|5|A|147
3J7Q|1|5|C|148
3J7Q|1|5|A|149
3J7Q|1|5|U|150
3J7Q|1|5|G|151
3J7Q|1|5|U|152
3J7Q|1|5|G|153
3J7Q|1|5|G|154

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

Ribosomal protein eL8

Chain N

Ribosomal protein eL15

Chain h

Ribosomal protein uL29