IL_3J7Q_019
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 3J7Q|1|5|C|696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_019 not in the Motif Atlas
- Geometric match to IL_1KUQ_002
- Geometric discrepancy: 0.3599
- The information below is about IL_1KUQ_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
3J7Q|1|5|C|459
3J7Q|1|5|C|460
*
3J7Q|1|5|G|695
3J7Q|1|5|C|696
3J7Q|1|5|G|697
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein eL6
- Chain r
- Ribosomal protein eL28
Coloring options: