IL_3J7Q_105

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAAAUGCCUCGUCA*UGACGCG

Length

22 nucleotides

Bulged bases

3J7Q|1|5|A|3785, 3J7Q|1|5|C|3791, 3J7Q|1|5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|C|3781
3J7Q|1|5|C|3782
3J7Q|1|5|A|3783
3J7Q|1|5|A|3784
3J7Q|1|5|A|3785
3J7Q|1|5|U|3786
3J7Q|1|5|G|3787
3J7Q|1|5|C|3788
3J7Q|1|5|C|3789
3J7Q|1|5|U|3790
3J7Q|1|5|C|3791
3J7Q|1|5|G|3792
3J7Q|1|5|U|3793
3J7Q|1|5|C|3794
3J7Q|1|5|A|3795
*
3J7Q|1|5|U|3805
3J7Q|1|5|G|3806
3J7Q|1|5|A|3807
3J7Q|1|5|C|3808
3J7Q|1|5|G|3809
3J7Q|1|5|C|3810
3J7Q|1|5|G|3811

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain n

Ribosomal protein eL41