IL_3J7Q_163
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUC*GG
- Length
- 6 nucleotides
- Bulged bases
- 3J7Q|1|5|U|513, 3J7Q|1|5|U|514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_163 not in the Motif Atlas
- Geometric match to IL_3MXH_004
- Geometric discrepancy: 0.1446
- The information below is about IL_3MXH_004
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
3J7Q|1|5|U|512
3J7Q|1|5|U|513
3J7Q|1|5|U|514
3J7Q|1|5|C|515
*
3J7Q|1|5|G|646
3J7Q|1|5|G|647
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
Coloring options: