IL_3J7Q_175
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCCG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 3J7Q|1|5|C|2084
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_175 not in the Motif Atlas
- Geometric match to IL_7A0S_042
- Geometric discrepancy: 0.1932
- The information below is about IL_7A0S_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
3J7Q|1|5|G|2082
3J7Q|1|5|C|2083
3J7Q|1|5|C|2084
3J7Q|1|5|G|2085
*
3J7Q|1|5|C|2272
3J7Q|1|5|G|2273
3J7Q|1|5|C|2274
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
- Chain e
- Ribosomal protein eL32
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