3D structure

PDB id
3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the idle mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGAUUCAACC*GGCGCAUUUCC
Length
21 nucleotides
Bulged bases
3J7Q|1|5|A|686
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7Q|1|5|G|464
3J7Q|1|5|G|465
3J7Q|1|5|A|466
3J7Q|1|5|U|467
3J7Q|1|5|U|468
3J7Q|1|5|C|469
3J7Q|1|5|A|470
3J7Q|1|5|A|471
3J7Q|1|5|C|472
3J7Q|1|5|C|473
*
3J7Q|1|5|G|681
3J7Q|1|5|G|682
3J7Q|1|5|C|683
3J7Q|1|5|G|684
3J7Q|1|5|C|685
3J7Q|1|5|A|686
3J7Q|1|5|U|687
3J7Q|1|5|U|688
3J7Q|1|5|U|689
3J7Q|1|5|C|690
3J7Q|1|5|C|691

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain E
Ribosomal protein eL6
Chain r
Ribosomal protein eL28

Coloring options:

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