IL_3J7Q_201

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAAGCCG*UGGCCCUUGAAAAU

Length

22 nucleotides

Bulged bases

3J7Q|1|5|C|2739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|A|2598
3J7Q|1|5|G|2599
3J7Q|1|5|A|2600
3J7Q|1|5|A|2601
3J7Q|1|5|G|2602
3J7Q|1|5|C|2603
3J7Q|1|5|C|2604
3J7Q|1|5|G|2605
*
3J7Q|1|5|U|2734
3J7Q|1|5|G|2735
3J7Q|1|5|G|2736
3J7Q|1|5|C|2737
3J7Q|1|5|C|2738
3J7Q|1|5|C|2739
3J7Q|1|5|U|2740
3J7Q|1|5|U|2741
3J7Q|1|5|G|2742
3J7Q|1|5|A|2743
3J7Q|1|5|A|2744
3J7Q|1|5|A|2745
3J7Q|1|5|A|2746
3J7Q|1|5|U|2747

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

Ribosomal protein uL2

Chain R

Ribosomal protein eL19

Chain g

Ribosomal protein eL34

Chain p

Ribosomal protein eL43