IL_3J7Q_202

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGGAAUG*CGAGAGAG

Length

16 nucleotides

Bulged bases

3J7Q|1|5|U|2661, 3J7Q|1|5|A|2674

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|C|2655
3J7Q|1|5|U|2656
3J7Q|1|5|G|2657
3J7Q|1|5|G|2658
3J7Q|1|5|A|2659
3J7Q|1|5|A|2660
3J7Q|1|5|U|2661
3J7Q|1|5|G|2662
*
3J7Q|1|5|C|2672
3J7Q|1|5|G|2673
3J7Q|1|5|A|2674
3J7Q|1|5|G|2675
3J7Q|1|5|A|2676
3J7Q|1|5|G|2677
3J7Q|1|5|A|2678
3J7Q|1|5|G|2679

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain Z

Ribosomal protein eL27

Chain c

Ribosomal protein eL30

Chain g

Ribosomal protein eL34

Chain p

Ribosomal protein eL43