IL_3J7R_022

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGCCGUG*CCGGCGACC

Length

16 nucleotides

Bulged bases

3J7R|1|5|G|666

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|G|487
3J7R|1|5|G|488
3J7R|1|5|C|489
3J7R|1|5|C|490
3J7R|1|5|G|491
3J7R|1|5|U|492
3J7R|1|5|G|493
*
3J7R|1|5|C|661
3J7R|1|5|C|662
3J7R|1|5|G|663
3J7R|1|5|G|664
3J7R|1|5|C|665
3J7R|1|5|G|666
3J7R|1|5|A|667
3J7R|1|5|C|668
3J7R|1|5|C|669

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain Q

Ribosomal protein eL18

Chain r

Ribosomal protein eL28