IL_3J7R_030
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUGGG*CGC
- Length
- 9 nucleotides
- Bulged bases
- 3J7R|1|5|U|728, 3J7R|1|5|G|729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_030 not in the Motif Atlas
- Geometric match to IL_8GLP_208
- Geometric discrepancy: 0.3656
- The information below is about IL_8GLP_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15698.7
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
3J7R|1|5|G|726
3J7R|1|5|C|727
3J7R|1|5|U|728
3J7R|1|5|G|729
3J7R|1|5|G|730
3J7R|1|5|G|731
*
3J7R|1|5|C|938
3J7R|1|5|G|939
3J7R|1|5|C|940
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein uL30
- Chain M
- Ribosomal protein eL14
- Chain S
- Ribosomal protein eL20
Coloring options: