IL_3J7R_048

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCGAAAG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

3J7R|1|5|A|1650, 3J7R|1|5|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|C|1520
3J7R|1|5|C|1521
3J7R|1|5|G|1522
3J7R|1|5|A|1523
3J7R|1|5|A|1524
3J7R|1|5|A|1525
3J7R|1|5|G|1526
*
3J7R|1|5|C|1648
3J7R|1|5|U|1649
3J7R|1|5|A|1650
3J7R|1|5|G|1651
3J7R|1|5|U|1652
3J7R|1|5|A|1653
3J7R|1|5|G|1654
3J7R|1|5|C|1655
3J7R|1|5|U|1656
3J7R|1|5|G|1657

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein eL15

Chain a

Ribosomal protein uL15

Chain j

Ribosomal protein eL37