IL_3J7R_071
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGU*GCC
- Length
- 7 nucleotides
- Bulged bases
- 3J7R|1|5|U|1947
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_071 not in the Motif Atlas
- Geometric match to IL_4V88_426
- Geometric discrepancy: 0.2756
- The information below is about IL_4V88_426
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
3J7R|1|5|G|1946
3J7R|1|5|U|1947
3J7R|1|5|G|1948
3J7R|1|5|U|1949
*
3J7R|1|5|G|2034
3J7R|1|5|C|2035
3J7R|1|5|C|2036
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain H
- Ribosomal protein uL6
- Chain I
- Ribosomal protein uL16
- Chain S
- Ribosomal protein eL20
- Chain m
- Ribosomal protein eL40
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