IL_3J7R_105
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCAAAUGCCUCGUCA*UGACGCG
- Length
- 22 nucleotides
- Bulged bases
- 3J7R|1|5|A|3785, 3J7R|1|5|C|3791, 3J7R|1|5|C|3810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|5|C|3781
3J7R|1|5|C|3782
3J7R|1|5|A|3783
3J7R|1|5|A|3784
3J7R|1|5|A|3785
3J7R|1|5|U|3786
3J7R|1|5|G|3787
3J7R|1|5|C|3788
3J7R|1|5|C|3789
3J7R|1|5|U|3790
3J7R|1|5|C|3791
3J7R|1|5|G|3792
3J7R|1|5|U|3793
3J7R|1|5|C|3794
3J7R|1|5|A|3795
*
3J7R|1|5|U|3805
3J7R|1|5|G|3806
3J7R|1|5|A|3807
3J7R|1|5|C|3808
3J7R|1|5|G|3809
3J7R|1|5|C|3810
3J7R|1|5|G|3811
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain S5
- Transfer RNA; tRNA
- Chain n
- Ribosomal protein eL41
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