IL_3J7R_110

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGAA*UUUCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|G|3939
3J7R|1|5|U|3940
3J7R|1|5|G|3941
3J7R|1|5|A|3942
3J7R|1|5|A|3943
*
3J7R|1|5|U|4069
3J7R|1|5|U|4070
3J7R|1|5|U|4071
3J7R|1|5|C|4072
3J7R|1|5|A|4073
3J7R|1|5|C|4074

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

Ribosomal protein uL2

Chain G

Ribosomal protein eL8

Chain N

Ribosomal protein eL15

Chain SB

Ribosomal protein eS1