IL_3J7R_114

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

3J7R|1|5|U|3957, 3J7R|1|5|G|3958, 3J7R|1|5|A|3962

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|G|3955
3J7R|1|5|G|3956
3J7R|1|5|U|3957
3J7R|1|5|G|3958
3J7R|1|5|U|3959
3J7R|1|5|A|3960
3J7R|1|5|G|3961
3J7R|1|5|A|3962
3J7R|1|5|A|3963
3J7R|1|5|U|3964
3J7R|1|5|A|3965
3J7R|1|5|A|3966
*
3J7R|1|5|U|4055
3J7R|1|5|A|4056
3J7R|1|5|C|4057

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S6

Transfer RNA; tRNA

Chain SZ

Ribosomal protein es25

Chain z

Ribosomal protein uL1