IL_3J7R_115

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGGAGG*CCGCCGGUGAAAUACC

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|G|3969
3J7R|1|5|G|3970
3J7R|1|5|G|3971
3J7R|1|5|A|3972
3J7R|1|5|G|3973
3J7R|1|5|G|3974
*
3J7R|1|5|C|4037
3J7R|1|5|C|4038
3J7R|1|5|G|4039
3J7R|1|5|C|4040
3J7R|1|5|C|4041
3J7R|1|5|G|4042
3J7R|1|5|G|4043
3J7R|1|5|U|4044
3J7R|1|5|G|4045
3J7R|1|5|A|4046
3J7R|1|5|A|4047
3J7R|1|5|A|4048
3J7R|1|5|U|4049
3J7R|1|5|A|4050
3J7R|1|5|C|4051
3J7R|1|5|C|4052

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S6

Transfer RNA; tRNA

Chain SZ

Ribosomal protein es25

Chain z

Ribosomal protein uL1